WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3AM.9b.1 Sequence Name  Y55F3AM.9b.1
Length (nt)  534   Chromosome Location  IV: 1006321-1007704
Chromosome . Primary Identifier  IV Chromosome Location . Start  1006321
Chromosome Location . End  1007704 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021926 Y55F3AM.9 Y55F3AM.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AM.9b Y55F3AM.9b 534   IV: 1006321-1006564

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3AM.9b.1 1006321 1007704 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112763   244   IV: 1006321-1006564 Caenorhabditis elegans
Exon112765   122   IV: 1007294-1007415 Caenorhabditis elegans
Exon112766   168   IV: 1007537-1007704 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3AM.9b.1 1006321 1007704 -1

1 Sequence

Length
534

1 Sequence Ontology Term

Identifier Name Description
transcript