WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:Y55F3AM.3b Sequence Name  Y55F3AM.3b
Length (nt)  1809   Chromosome Location  IV: 1012788-1019268
Chromosome . Primary Identifier  IV Chromosome Location . Start  1012788
Chromosome Location . End  1019268 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.3b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021921 rbm-39 Y55F3AM.3 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3AM.3b 1012788 1019268 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112802   63   IV: 1012788-1012850 Caenorhabditis elegans
Exon112805   50   IV: 1012908-1012957 Caenorhabditis elegans
Exon112808   66   IV: 1013075-1013140 Caenorhabditis elegans
Exon112813   195   IV: 1013332-1013526 Caenorhabditis elegans
Exon112818   95   IV: 1014237-1014331 Caenorhabditis elegans
Exon112824   551   IV: 1015443-1015993 Caenorhabditis elegans
Exon112830   690   IV: 1017033-1017722 Caenorhabditis elegans
Exon112831   99   IV: 1019170-1019268 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3AM.3b 1012788 1019268 1

1 Sequence

Length
1809

1 Sequence Ontology Term

Identifier Name Description
transcript