WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y55F3AM.2 Sequence Name  Y55F3AM.2
Length (nt)  918   Chromosome Location  IV: 1046032-1046082
Chromosome . Primary Identifier  IV Chromosome Location . Start  1046032
Chromosome Location . End  1046082
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36416 SRX-12 35.5 305 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00057527
WBRNAi00037518

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y55F3AM.2 1046032 1046082 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005903 srx-12 Y55F3AM.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y55F3AM.2 1046032 1046082 1
CDS:Y55F3AM.2 1046138 1046298 1
CDS:Y55F3AM.2 1047171 1047543 1
CDS:Y55F3AM.2 1048469 1048692 1
CDS:Y55F3AM.2 1049115 1049223 1

1 Sequence

Length
918

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y55F3AM.2.1 Y55F3AM.2.1 1250   IV: 1045983-1049506