WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3AM.10.1 Sequence Name  Y55F3AM.10.1
Length (nt)  925   Chromosome Location  IV: 1027787-1030039
Chromosome . Primary Identifier  IV Chromosome Location . Start  1027787
Chromosome Location . End  1030039 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021927 abhd-14 Y55F3AM.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AM.10 Y55F3AM.10 741   IV: 1027948-1028120

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3AM.10.1 1027787 1030039 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112882   334   IV: 1027787-1028120 Caenorhabditis elegans
Exon112883   88   IV: 1028185-1028272 Caenorhabditis elegans
Exon112884   202   IV: 1029428-1029629 Caenorhabditis elegans
Exon112885   122   IV: 1029682-1029803 Caenorhabditis elegans
Exon112886   179   IV: 1029861-1030039 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3AM.10.1 1027787 1030039 -1

1 Sequence

Length
925

1 Sequence Ontology Term

Identifier Name Description
transcript