WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3AM.1.1 Sequence Name  Y55F3AM.1.1
Length (nt)  631   Chromosome Location  IV: 1056892-1057619
Chromosome . Primary Identifier  IV Chromosome Location . Start  1056892
Chromosome Location . End  1057619 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021920 mrps-25 Y55F3AM.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AM.1 Y55F3AM.1 513   IV: 1056905-1057151

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3AM.1.1 1056892 1057619 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112884   260   IV: 1056892-1057151 Caenorhabditis elegans
Exon112885   167   IV: 1057201-1057367 Caenorhabditis elegans
Exon112886   204   IV: 1057416-1057619 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3AM.1.1 1056892 1057619 1

1 Sequence

Length
631

1 Sequence Ontology Term

Identifier Name Description
transcript