WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3AM.14.1 Sequence Name  Y55F3AM.14.1
Length (nt)  2809   Chromosome Location  IV: 1058076-1067525
Chromosome . Primary Identifier  IV Chromosome Location . Start  1058076
Chromosome Location . End  1067525 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021931 znf-782 Y55F3AM.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AM.14 Y55F3AM.14 1989   IV: 1058845-1059192

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3AM.14.1 1058076 1067525 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112937   1117   IV: 1058076-1059192 Caenorhabditis elegans
Exon112938   134   IV: 1059863-1059996 Caenorhabditis elegans
Exon112940   245   IV: 1060072-1060316 Caenorhabditis elegans
Exon112942   114   IV: 1060752-1060865 Caenorhabditis elegans
Exon112944   209   IV: 1060963-1061171 Caenorhabditis elegans
Exon112946   153   IV: 1061322-1061474 Caenorhabditis elegans
Exon112948   135   IV: 1061544-1061678 Caenorhabditis elegans
Exon112950   175   IV: 1062479-1062653 Caenorhabditis elegans
Exon112952   483   IV: 1062703-1063185 Caenorhabditis elegans
Exon112954   44   IV: 1067482-1067525 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3AM.14.1 1058076 1067525 -1

1 Sequence

Length
2809

1 Sequence Ontology Term

Identifier Name Description
transcript