WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C44B12.2b.1 Sequence Name  C44B12.2b.1
Length (nt)  534   Chromosome Location  IV: 1108938-1110567
Chromosome . Primary Identifier  IV Chromosome Location . Start  1108938
Chromosome Location . End  1110567 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44B12.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003893 ost-1 C44B12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44B12.2b C44B12.2b 534   IV: 1108938-1108946

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C44B12.2b.1 1108938 1110567 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112940   9   IV: 1108938-1108946 Caenorhabditis elegans
Exon112942   207   IV: 1109215-1109421 Caenorhabditis elegans
Exon112944   147   IV: 1109896-1110042 Caenorhabditis elegans
Exon112945   171   IV: 1110397-1110567 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C44B12.2b.1 1108938 1110567 1

1 Sequence

Length
534

1 Sequence Ontology Term

Identifier Name Description
transcript