WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C44B12.2a Sequence Name  C44B12.2a
Length (nt)  795   Chromosome Location  IV: 1107449-1107511
Chromosome . Primary Identifier  IV Chromosome Location . Start  1107449
Chromosome Location . End  1107511
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C44B12.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE08703 OST-1, isoform a 30.2 264 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00064054
WBRNAi00042417
WBRNAi00027583
WBRNAi00001609

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C44B12.2a 1107449 1107511 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003893 ost-1 C44B12.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C44B12.2a 1107449 1107511 1
CDS:C44B12.2a 1107561 1107633 1
CDS:C44B12.2a 1108813 1108946 1
CDS:C44B12.2a 1109215 1109421 1
CDS:C44B12.2a 1109896 1110042 1
CDS:C44B12.2a 1110397 1110567 1

1 Sequence

Length
795

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C44B12.2a.1 C44B12.2a.1 1153   IV: 1107396-1110872