WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y104H12D.2.1 Sequence Name  Y104H12D.2.1
Length (nt)  1075   Chromosome Location  IV: 1178022-1182864
Chromosome . Primary Identifier  IV Chromosome Location . Start  1178022
Chromosome Location . End  1182864 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y104H12D.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022426 Y104H12D.2 Y104H12D.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y104H12D.2 Y104H12D.2 984   IV: 1178039-1178187

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y104H12D.2.1 1178022 1182864 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113037   166   IV: 1178022-1178187 Caenorhabditis elegans
Exon113038   142   IV: 1178299-1178440 Caenorhabditis elegans
Exon113039   240   IV: 1178547-1178786 Caenorhabditis elegans
Exon113040   101   IV: 1179487-1179587 Caenorhabditis elegans
Exon113041   223   IV: 1181314-1181536 Caenorhabditis elegans
Exon113043   203   IV: 1182662-1182864 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y104H12D.2.1 1178022 1182864 1

1 Sequence

Length
1075

1 Sequence Ontology Term

Identifier Name Description
transcript