WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53H1.1e.1 Sequence Name  F53H1.1e.1
Length (nt)  708   Chromosome Location  IV: 1297400-1299345
Chromosome . Primary Identifier  IV Chromosome Location . Start  1297400
Chromosome Location . End  1299345 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H1.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018776 ddx-46 F53H1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53H1.1e F53H1.1e 708   IV: 1297400-1297447

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53H1.1e.1 1297400 1299345 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113216   48   IV: 1297400-1297447 Caenorhabditis elegans
Exon113221   299   IV: 1297586-1297884 Caenorhabditis elegans
Exon113222   361   IV: 1298985-1299345 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53H1.1e.1 1297400 1299345 -1

1 Sequence

Length
708

1 Sequence Ontology Term

Identifier Name Description
transcript