WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53H1.1d Sequence Name  F53H1.1d
Length (nt)  1833   Chromosome Location  IV: 1297400-1297447
Chromosome . Primary Identifier  IV Chromosome Location . Start  1297400
Chromosome Location . End  1297447
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53H1.1d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49055 DDX-46, isoform d 69.9 610 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00048182
WBRNAi00048183
WBRNAi00048184
WBRNAi00058302
WBRNAi00075266
WBRNAi00032717
WBRNAi00071397
WBRNAi00075267
WBRNAi00083656
WBRNAi00083827
WBRNAi00075479
WBRNAi00025602

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F53H1.1d 1297400 1297447 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018776 ddx-46 F53H1.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F53H1.1d 1297400 1297447 -1
CDS:F53H1.1d 1300556 1300773 -1
CDS:F53H1.1d 1301935 1302094 -1
CDS:F53H1.1d 1303064 1303339 -1
CDS:F53H1.1d 1303411 1303530 -1
CDS:F53H1.1d 1304386 1304586 -1
CDS:F53H1.1d 1307909 1308462 -1
CDS:F53H1.1d 1309389 1309644 -1

1 Sequence

Length
1833

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53H1.1d.1 F53H1.1d.1 1833   IV: 1297400-1309644