WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58F6.5.1 Sequence Name  F58F6.5.1
Length (nt)  713   Chromosome Location  IV: 1343679-1344798
Chromosome . Primary Identifier  IV Chromosome Location . Start  1343679
Chromosome Location . End  1344798 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58F6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019053 F58F6.5 F58F6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58F6.5 F58F6.5 366   IV: 1343679-1343714

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58F6.5.1 1343679 1344798 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113309   36   IV: 1343679-1343714 Caenorhabditis elegans
Exon113310   144   IV: 1343866-1344009 Caenorhabditis elegans
Exon113311   121   IV: 1344121-1344241 Caenorhabditis elegans
Exon113312   126   IV: 1344288-1344413 Caenorhabditis elegans
Exon113313   181   IV: 1344464-1344644 Caenorhabditis elegans
Exon113314   105   IV: 1344694-1344798 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58F6.5.1 1343679 1344798 1

1 Sequence

Length
713

1 Sequence Ontology Term

Identifier Name Description
transcript