WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58F6.2.1 Sequence Name  F58F6.2.1
Length (nt)  953   Chromosome Location  IV: 1357736-1359225
Chromosome . Primary Identifier  IV Chromosome Location . Start  1357736
Chromosome Location . End  1359225 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58F6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000679 col-105 F58F6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58F6.2 F58F6.2 873   IV: 1357816-1357867

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58F6.2.1 1357736 1359225 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113326   132   IV: 1357736-1357867 Caenorhabditis elegans
Exon113327   665   IV: 1357945-1358609 Caenorhabditis elegans
Exon113328   81   IV: 1359026-1359106 Caenorhabditis elegans
Exon113329   75   IV: 1359151-1359225 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58F6.2.1 1357736 1359225 -1

1 Sequence

Length
953

1 Sequence Ontology Term

Identifier Name Description
transcript