WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y77E11A.14.1 Sequence Name  Y77E11A.14.1
Length (nt)  529   Chromosome Location  IV: 1406542-1408131
Chromosome . Primary Identifier  IV Chromosome Location . Start  1406542
Chromosome Location . End  1408131 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y77E11A.14.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022314 spp-31 Y77E11A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y77E11A.14 Y77E11A.14 432   IV: 1406567-1406608

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y77E11A.14.1 1406542 1408131 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113378   67   IV: 1406542-1406608 Caenorhabditis elegans
Exon113379   147   IV: 1406660-1406806 Caenorhabditis elegans
Exon113382   105   IV: 1407468-1407572 Caenorhabditis elegans
Exon113384   210   IV: 1407922-1408131 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y77E11A.14.1 1406542 1408131 1

1 Sequence

Length
529

1 Sequence Ontology Term

Identifier Name Description
transcript