WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y77E11A.6a Sequence Name  Y77E11A.6a
Length (nt)  327   Chromosome Location  IV: 1408707-1408834
Chromosome . Primary Identifier  IV Chromosome Location . Start  1408707
Chromosome Location . End  1408834
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y77E11A.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25620 RPC-11, isoform a 12.0 108 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00058517
WBRNAi00098661
WBRNAi00098660
WBRNAi00021495
WBRNAi00098717
WBRNAi00098718
WBRNAi00037875
WBRNAi00098685
WBRNAi00098684
WBRNAi00098627
WBRNAi00098626

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y77E11A.6a 1408707 1408834 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022309 rpc-11 Y77E11A.6 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y77E11A.6a 1408707 1408834 -1
CDS:Y77E11A.6a 1409839 1410037 -1

1 Sequence

Length
327

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y77E11A.6a.1 Y77E11A.6a.1 430   IV: 1408608-1410041