WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y77E11A.4 Sequence Name  Y77E11A.4
Length (nt)  504   Chromosome Location  IV: 1420988-1421126
Chromosome . Primary Identifier  IV Chromosome Location . Start  1420988
Chromosome Location . End  1421126
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y77E11A.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25618 JTR-1 19.3 167 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00058515
WBRNAi00021481
WBRNAi00037873

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y77E11A.4 1420988 1421126 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002180 jtr-1 Y77E11A.4 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y77E11A.4 1420988 1421126 1
CDS:Y77E11A.4 1421172 1421315 1
CDS:Y77E11A.4 1421428 1421648 1

1 Sequence

Length
504

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y77E11A.4.1 Y77E11A.4.1 705   IV: 1420929-1421790