WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y77E11A.2.1 Sequence Name  Y77E11A.2.1
Length (nt)  1280   Chromosome Location  IV: 1457075-1459521
Chromosome . Primary Identifier  IV Chromosome Location . Start  1457075
Chromosome Location . End  1459521 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y77E11A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022307 nadk-1 Y77E11A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y77E11A.2 Y77E11A.2 1113   IV: 1457084-1457179

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y77E11A.2.1 1457075 1459521 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113473   105   IV: 1457075-1457179 Caenorhabditis elegans
Exon113474   89   IV: 1457227-1457315 Caenorhabditis elegans
Exon113475   719   IV: 1458223-1458941 Caenorhabditis elegans
Exon113476   367   IV: 1459155-1459521 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y77E11A.2.1 1457075 1459521 1

1 Sequence

Length
1280

1 Sequence Ontology Term

Identifier Name Description
transcript