WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K03H6.5a.1 Sequence Name  K03H6.5a.1
Length (nt)  1430   Chromosome Location  IV: 1527114-1536416
Chromosome . Primary Identifier  IV Chromosome Location . Start  1527114
Chromosome Location . End  1536416 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K03H6.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019370 K03H6.5 K03H6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K03H6.5a K03H6.5a 1305   IV: 1527221-1527434

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K03H6.5a.1 1527114 1536416 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113607   321   IV: 1527114-1527434 Caenorhabditis elegans
Exon113609   168   IV: 1527555-1527722 Caenorhabditis elegans
Exon113611   155   IV: 1528451-1528605 Caenorhabditis elegans
Exon113613   306   IV: 1530057-1530362 Caenorhabditis elegans
Exon113615   73   IV: 1530436-1530508 Caenorhabditis elegans
Exon113617   180   IV: 1530557-1530736 Caenorhabditis elegans
Exon113619   86   IV: 1532312-1532397 Caenorhabditis elegans
Exon113622   141   IV: 1536276-1536416 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K03H6.5a.1 1527114 1536416 -1

1 Sequence

Length
1430

1 Sequence Ontology Term

Identifier Name Description
transcript