WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C34H4.4.1 Sequence Name  C34H4.4.1
Length (nt)  938   Chromosome Location  IV: 1548721-1549714
Chromosome . Primary Identifier  IV Chromosome Location . Start  1548721
Chromosome Location . End  1549714 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C34H4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000681 col-107 C34H4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C34H4.4 C34H4.4 885   IV: 1548734-1548874

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C34H4.4.1 1548721 1549714 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113631   154   IV: 1548721-1548874 Caenorhabditis elegans
Exon113632   784   IV: 1548931-1549714 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C34H4.4.1 1548721 1549714 1

1 Sequence

Length
938

1 Sequence Ontology Term

Identifier Name Description
transcript