WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41D4B.21b.1 Sequence Name  Y41D4B.21b.1
Length (nt)  1993   Chromosome Location  IV: 1637963-1645294
Chromosome . Primary Identifier  IV Chromosome Location . Start  1637963
Chromosome Location . End  1645294 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41D4B.21b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021522 nhr-274 Y41D4B.21 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41D4B.21b Y41D4B.21b 954   IV: 1638659-1638903

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41D4B.21b.1 1637963 1645294 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113801   941   IV: 1637963-1638903 Caenorhabditis elegans
Exon113805   113   IV: 1639625-1639737 Caenorhabditis elegans
Exon113810   330   IV: 1641583-1641912 Caenorhabditis elegans
Exon113814   118   IV: 1641969-1642086 Caenorhabditis elegans
Exon113818   201   IV: 1644004-1644204 Caenorhabditis elegans
Exon113821   290   IV: 1645005-1645294 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41D4B.21b.1 1637963 1645294 -1

1 Sequence

Length
1993

1 Sequence Ontology Term

Identifier Name Description
transcript