WormMine: Gene WBGene00220154

• WormBase Gene ID: WBGene00220154
• Gene Name: Y41D4B.35
• Sequence Name: Y41D4B.35
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by mrps-5 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 56

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00220154

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:Y41D4B.35	Y41D4B.35	56	IV: 1651899-1651954

Other

0 CDSs

0 RNAi Result

6 Allele

• gk963722
• gk964482
• gk963025
• WBVar02113039
• WBVar01579926
• WBVar01964791

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: WBGene00220154
• Start: 1651899
• End: 1651954
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrIV_1646942..1651898
• Length (nt): 4957
• Chromosome Location: IV: 1646942-1651898
• Organism: Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in mrps-5(RNAi) animals comparing to animals injected with empty vector.	Differential expression was assessed using a Partial least-squares discriminant analysis (PLS-DA) using mixomics setting a variable of importance (VIP) score of greater than 1 as significant.	WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00220154
• Start: 1651899
• End: 1651954
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 56

1 Sequence Ontology Term