WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41D4A.6d.1 Sequence Name  Y41D4A.6d.1
Length (nt)  1396   Chromosome Location  IV: 1741065-1745503
Chromosome . Primary Identifier  IV Chromosome Location . Start  1741065
Chromosome Location . End  1745503 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41D4A.6d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021508 Y41D4A.6 Y41D4A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41D4A.6d Y41D4A.6d 1365   IV: 1741096-1741432

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41D4A.6d.1 1741065 1745503 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113921   368   IV: 1741065-1741432 Caenorhabditis elegans
Exon113927   144   IV: 1741480-1741623 Caenorhabditis elegans
Exon113935   453   IV: 1743947-1744399 Caenorhabditis elegans
Exon113937   276   IV: 1745025-1745300 Caenorhabditis elegans
Exon113939   155   IV: 1745349-1745503 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41D4A.6d.1 1741065 1745503 -1

1 Sequence

Length
1396

1 Sequence Ontology Term

Identifier Name Description
transcript