WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41D4A.4e.1 Sequence Name  Y41D4A.4e.1
Length (nt)  1904   Chromosome Location  IV: 1746003-1750795
Chromosome . Primary Identifier  IV Chromosome Location . Start  1746003
Chromosome Location . End  1750795 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41D4A.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021506 Y41D4A.4 Y41D4A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41D4A.4e Y41D4A.4e 1770   IV: 1746003-1746110

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41D4A.4e.1 1746003 1750795 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113941   108   IV: 1746003-1746110 Caenorhabditis elegans
Exon113945   157   IV: 1746166-1746322 Caenorhabditis elegans
Exon113950   368   IV: 1746376-1746743 Caenorhabditis elegans
Exon113954   299   IV: 1748019-1748317 Caenorhabditis elegans
Exon113958   972   IV: 1749824-1750795 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41D4A.4e.1 1746003 1750795 1

1 Sequence

Length
1904

1 Sequence Ontology Term

Identifier Name Description
transcript