WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41D4A.4b.1 Sequence Name  Y41D4A.4b.1
Length (nt)  1752   Chromosome Location  IV: 1746003-1751317
Chromosome . Primary Identifier  IV Chromosome Location . Start  1746003
Chromosome Location . End  1751317 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41D4A.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021506 Y41D4A.4 Y41D4A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41D4A.4b Y41D4A.4b 1752   IV: 1746003-1746110

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41D4A.4b.1 1746003 1751317 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113942   108   IV: 1746003-1746110 Caenorhabditis elegans
Exon113943   166   IV: 1746157-1746322 Caenorhabditis elegans
Exon113948   368   IV: 1746376-1746743 Caenorhabditis elegans
Exon113952   299   IV: 1748019-1748317 Caenorhabditis elegans
Exon113956   666   IV: 1749824-1750489 Caenorhabditis elegans
Exon113959   145   IV: 1751173-1751317 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41D4A.4b.1 1746003 1751317 1

1 Sequence

Length
1752

1 Sequence Ontology Term

Identifier Name Description
transcript