WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y41D4A.7a.1 Sequence Name  Y41D4A.7a.1
Length (nt)  1880   Chromosome Location  IV: 1751701-1761570
Chromosome . Primary Identifier  IV Chromosome Location . Start  1751701
Chromosome Location . End  1761570 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y41D4A.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021509 Y41D4A.7 Y41D4A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y41D4A.7a Y41D4A.7a 1122   IV: 1752457-1752825

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y41D4A.7a.1 1751701 1761570 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113963   1125   IV: 1751701-1752825 Caenorhabditis elegans
Exon113968   102   IV: 1755735-1755836 Caenorhabditis elegans
Exon113970   211   IV: 1756597-1756807 Caenorhabditis elegans
Exon113972   217   IV: 1757810-1758026 Caenorhabditis elegans
Exon113974   178   IV: 1759771-1759948 Caenorhabditis elegans
Exon113976   47   IV: 1761524-1761570 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y41D4A.7a.1 1751701 1761570 -1

1 Sequence

Length
1880

1 Sequence Ontology Term

Identifier Name Description
transcript