WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07A9.2.1 Sequence Name  K07A9.2.1
Length (nt)  1742   Chromosome Location  IV: 1824481-1834247
Chromosome . Primary Identifier  IV Chromosome Location . Start  1824481
Chromosome Location . End  1834247 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07A9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000553 cmk-1 K07A9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07A9.2 K07A9.2 1047   IV: 1824528-1824632

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07A9.2.1 1824481 1834247 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114041   152   IV: 1824481-1824632 Caenorhabditis elegans
Exon114042   119   IV: 1830495-1830613 Caenorhabditis elegans
Exon114043   157   IV: 1831915-1832071 Caenorhabditis elegans
Exon114044   266   IV: 1832164-1832429 Caenorhabditis elegans
Exon114045   104   IV: 1832866-1832969 Caenorhabditis elegans
Exon114046   170   IV: 1833019-1833188 Caenorhabditis elegans
Exon114047   774   IV: 1833474-1834247 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07A9.2.1 1824481 1834247 1

1 Sequence

Length
1742

1 Sequence Ontology Term

Identifier Name Description
transcript