WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38C1BA.3 Sequence Name  Y38C1BA.3
Length (nt)  876   Chromosome Location  IV: 1817658-1817722
Chromosome . Primary Identifier  IV Chromosome Location . Start  1817658
Chromosome Location . End  1817722
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1BA.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21569 COL-109 29.0 291 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00001065
WBRNAi00056003
WBRNAi00020260
WBRNAi00020266
WBRNAi00036835
WBRNAi00070728
WBRNAi00070729

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38C1BA.3 1817658 1817722 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000683 col-109 Y38C1BA.3 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38C1BA.3 1817658 1817722 -1
CDS:Y38C1BA.3 1818404 1819055 -1
CDS:Y38C1BA.3 1819238 1819317 -1
CDS:Y38C1BA.3 1820172 1820250 -1

1 Sequence

Length
876

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38C1BA.3.1 Y38C1BA.3.1 1145   IV: 1817392-1820253