WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52C12.4g.1 Sequence Name  F52C12.4g.1
Length (nt)  5404   Chromosome Location  IV: 1924002-1948079
Chromosome . Primary Identifier  IV Chromosome Location . Start  1924002
Chromosome Location . End  1948079 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52C12.4g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018681 denn-4 F52C12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52C12.4g F52C12.4g 4635   IV: 1924008-1924077

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52C12.4g.1 1924002 1948079 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114162   76   IV: 1924002-1924077 Caenorhabditis elegans
Exon114174   125   IV: 1924567-1924691 Caenorhabditis elegans
Exon114182   237   IV: 1926013-1926249 Caenorhabditis elegans
Exon114190   387   IV: 1927651-1928037 Caenorhabditis elegans
Exon114198   150   IV: 1929167-1929316 Caenorhabditis elegans
Exon114207   150   IV: 1929372-1929521 Caenorhabditis elegans
Exon114214   212   IV: 1930862-1931073 Caenorhabditis elegans
Exon114223   373   IV: 1933690-1934062 Caenorhabditis elegans
Exon114231   179   IV: 1934121-1934299 Caenorhabditis elegans
Exon114239   155   IV: 1935330-1935484 Caenorhabditis elegans
Exon114247   62   IV: 1935543-1935604 Caenorhabditis elegans
Exon114251   39   IV: 1936377-1936415 Caenorhabditis elegans
Exon114259   69   IV: 1937425-1937493 Caenorhabditis elegans
Exon114267   91   IV: 1938109-1938199 Caenorhabditis elegans
Exon114275   92   IV: 1939097-1939188 Caenorhabditis elegans
Exon114283   252   IV: 1939240-1939491 Caenorhabditis elegans
Exon114291   574   IV: 1940241-1940814 Caenorhabditis elegans
Exon114299   393   IV: 1942437-1942829 Caenorhabditis elegans
Exon114307   317   IV: 1943589-1943905 Caenorhabditis elegans
Exon114315   179   IV: 1944766-1944944 Caenorhabditis elegans
Exon114323   339   IV: 1945831-1946169 Caenorhabditis elegans
Exon114331   953   IV: 1947127-1948079 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52C12.4g.1 1924002 1948079 1

1 Sequence

Length
5404

1 Sequence Ontology Term

Identifier Name Description
transcript