WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52C12.4f.1 Sequence Name  F52C12.4f.1
Length (nt)  4602   Chromosome Location  IV: 1924008-1947316
Chromosome . Primary Identifier  IV Chromosome Location . Start  1924008
Chromosome Location . End  1947316 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52C12.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018681 denn-4 F52C12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52C12.4f F52C12.4f 4602   IV: 1924008-1924077

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52C12.4f.1 1924008 1947316 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114165   70   IV: 1924008-1924077 Caenorhabditis elegans
Exon114173   125   IV: 1924567-1924691 Caenorhabditis elegans
Exon114181   237   IV: 1926013-1926249 Caenorhabditis elegans
Exon114189   387   IV: 1927651-1928037 Caenorhabditis elegans
Exon114197   150   IV: 1929167-1929316 Caenorhabditis elegans
Exon114202   156   IV: 1929366-1929521 Caenorhabditis elegans
Exon114213   212   IV: 1930862-1931073 Caenorhabditis elegans
Exon114222   373   IV: 1933690-1934062 Caenorhabditis elegans
Exon114230   179   IV: 1934121-1934299 Caenorhabditis elegans
Exon114238   155   IV: 1935330-1935484 Caenorhabditis elegans
Exon114246   62   IV: 1935543-1935604 Caenorhabditis elegans
Exon114258   69   IV: 1937425-1937493 Caenorhabditis elegans
Exon114266   91   IV: 1938109-1938199 Caenorhabditis elegans
Exon114274   92   IV: 1939097-1939188 Caenorhabditis elegans
Exon114282   252   IV: 1939240-1939491 Caenorhabditis elegans
Exon114290   574   IV: 1940241-1940814 Caenorhabditis elegans
Exon114298   393   IV: 1942437-1942829 Caenorhabditis elegans
Exon114306   317   IV: 1943589-1943905 Caenorhabditis elegans
Exon114314   179   IV: 1944766-1944944 Caenorhabditis elegans
Exon114322   339   IV: 1945831-1946169 Caenorhabditis elegans
Exon114327   190   IV: 1947127-1947316 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52C12.4f.1 1924008 1947316 1

1 Sequence

Length
4602

1 Sequence Ontology Term

Identifier Name Description
transcript