WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F52C12.1b Sequence Name  F52C12.1b
Length (nt)  957   Chromosome Location  IV: 1960697-1960836
Chromosome . Primary Identifier  IV Chromosome Location . Start  1960697
Chromosome Location . End  1960836
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52C12.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48525 TDPO-1, isoform b 36.5 318 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00047926
WBRNAi00007988
WBRNAi00015368
WBRNAi00032587

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52C12.1b 1960697 1960836 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018678 tdpo-1 F52C12.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52C12.1b 1960697 1960836 1
CDS:F52C12.1b 1961643 1962094 1
CDS:F52C12.1b 1962454 1962635 1
CDS:F52C12.1b 1962941 1963123 1

1 Sequence

Length
957

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52C12.1b.1 F52C12.1b.1 957   IV: 1960697-1963123