WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y76B12C.7b.1 Sequence Name  Y76B12C.7b.1
Length (nt)  3792   Chromosome Location  IV: 2009154-2030225
Chromosome . Primary Identifier  IV Chromosome Location . Start  2009154
Chromosome Location . End  2030225 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y76B12C.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022301 cpsf-1 Y76B12C.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y76B12C.7b Y76B12C.7b 3792   IV: 2009154-2009208

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y76B12C.7b.1 2009154 2030225 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114418   55   IV: 2009154-2009208 Caenorhabditis elegans
Exon114421   340   IV: 2010399-2010738 Caenorhabditis elegans
Exon114425   721   IV: 2013054-2013774 Caenorhabditis elegans
Exon114427   316   IV: 2015249-2015564 Caenorhabditis elegans
Exon114429   170   IV: 2017577-2017746 Caenorhabditis elegans
Exon114432   185   IV: 2019244-2019428 Caenorhabditis elegans
Exon114434   270   IV: 2020863-2021132 Caenorhabditis elegans
Exon114436   120   IV: 2022574-2022693 Caenorhabditis elegans
Exon114438   469   IV: 2023338-2023806 Caenorhabditis elegans
Exon114440   282   IV: 2025632-2025913 Caenorhabditis elegans
Exon114443   377   IV: 2027471-2027847 Caenorhabditis elegans
Exon114446   413   IV: 2029046-2029458 Caenorhabditis elegans
Exon114447   74   IV: 2030152-2030225 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y76B12C.7b.1 2009154 2030225 -1

1 Sequence

Length
3792

1 Sequence Ontology Term

Identifier Name Description
transcript