WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y76B12C.1a.1 Sequence Name  Y76B12C.1a.1
Length (nt)  2872   Chromosome Location  IV: 2037191-2043549
Chromosome . Primary Identifier  IV Chromosome Location . Start  2037191
Chromosome Location . End  2043549 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y76B12C.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022295 cng-2 Y76B12C.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y76B12C.1a Y76B12C.1a 2460   IV: 2037245-2037355

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y76B12C.1a.1 2037191 2043549 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114454   165   IV: 2037191-2037355 Caenorhabditis elegans
Exon114455   87   IV: 2037463-2037549 Caenorhabditis elegans
Exon114456   264   IV: 2037609-2037872 Caenorhabditis elegans
Exon114457   188   IV: 2037919-2038106 Caenorhabditis elegans
Exon114458   209   IV: 2038747-2038955 Caenorhabditis elegans
Exon114459   165   IV: 2039019-2039183 Caenorhabditis elegans
Exon114460   221   IV: 2039231-2039451 Caenorhabditis elegans
Exon114461   283   IV: 2039496-2039778 Caenorhabditis elegans
Exon114462   88   IV: 2040941-2041028 Caenorhabditis elegans
Exon114463   82   IV: 2041138-2041219 Caenorhabditis elegans
Exon114464   442   IV: 2041451-2041892 Caenorhabditis elegans
Exon114466   92   IV: 2041942-2042033 Caenorhabditis elegans
Exon114468   96   IV: 2042919-2043014 Caenorhabditis elegans
Exon114471   490   IV: 2043060-2043549 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y76B12C.1a.1 2037191 2043549 1

1 Sequence

Length
2872

1 Sequence Ontology Term

Identifier Name Description
transcript