WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05C11.4a.1 Sequence Name  R05C11.4a.1
Length (nt)  973   Chromosome Location  IV: 2051495-2057079
Chromosome . Primary Identifier  IV Chromosome Location . Start  2051495
Chromosome Location . End  2057079 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05C11.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044467 R05C11.4 R05C11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05C11.4a R05C11.4a 597   IV: 2051500-2051587

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05C11.4a.1 2051495 2057079 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114473   93   IV: 2051495-2051587 Caenorhabditis elegans
Exon114474   190   IV: 2051637-2051826 Caenorhabditis elegans
Exon114475   113   IV: 2055766-2055878 Caenorhabditis elegans
Exon114477   167   IV: 2055928-2056094 Caenorhabditis elegans
Exon114480   410   IV: 2056670-2057079 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05C11.4a.1 2051495 2057079 1

1 Sequence

Length
973

1 Sequence Ontology Term

Identifier Name Description
transcript