WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R05C11.2.1 Sequence Name  R05C11.2.1
Length (nt)  1640   Chromosome Location  IV: 2057378-2059111
Chromosome . Primary Identifier  IV Chromosome Location . Start  2057378
Chromosome Location . End  2059111 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R05C11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019874 R05C11.2 R05C11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05C11.2 R05C11.2 1140   IV: 2057878-2058156

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R05C11.2.1 2057378 2059111 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114536   779   IV: 2057378-2058156 Caenorhabditis elegans
Exon114537   745   IV: 2058203-2058947 Caenorhabditis elegans
Exon114538   116   IV: 2058996-2059111 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R05C11.2.1 2057378 2059111 -1

1 Sequence

Length
1640

1 Sequence Ontology Term

Identifier Name Description
transcript