WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54E4.3.1 Sequence Name  C54E4.3.1
Length (nt)  2329   Chromosome Location  IV: 2150647-2159169
Chromosome . Primary Identifier  IV Chromosome Location . Start  2150647
Chromosome Location . End  2159169 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54E4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001557 gcy-37 C54E4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54E4.3 C54E4.3 2127   IV: 2150793-2150948

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54E4.3.1 2150647 2159169 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114603   302   IV: 2150647-2150948 Caenorhabditis elegans
Exon114604   98   IV: 2151298-2151395 Caenorhabditis elegans
Exon114605   140   IV: 2151869-2152008 Caenorhabditis elegans
Exon114606   93   IV: 2152343-2152435 Caenorhabditis elegans
Exon114607   358   IV: 2153117-2153474 Caenorhabditis elegans
Exon114608   146   IV: 2154210-2154355 Caenorhabditis elegans
Exon114609   110   IV: 2154408-2154517 Caenorhabditis elegans
Exon114610   192   IV: 2154971-2155162 Caenorhabditis elegans
Exon114611   92   IV: 2155305-2155396 Caenorhabditis elegans
Exon114612   91   IV: 2156212-2156302 Caenorhabditis elegans
Exon114613   159   IV: 2157302-2157460 Caenorhabditis elegans
Exon114614   207   IV: 2157511-2157717 Caenorhabditis elegans
Exon114615   107   IV: 2158076-2158182 Caenorhabditis elegans
Exon114616   101   IV: 2158254-2158354 Caenorhabditis elegans
Exon114617   74   IV: 2158970-2159043 Caenorhabditis elegans
Exon114618   59   IV: 2159111-2159169 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54E4.3.1 2150647 2159169 -1

1 Sequence

Length
2329

1 Sequence Ontology Term

Identifier Name Description
transcript