WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C54E4.2a Sequence Name  C54E4.2a
Length (nt)  681   Chromosome Location  IV: 2136962-2137039
Chromosome . Primary Identifier  IV Chromosome Location . Start  2136962
Chromosome Location . End  2137039
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54E4.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20611 TEST-1, isoform a 25.8 226 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00043155
WBRNAi00012397
WBRNAi00030146
WBRNAi00089021

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C54E4.2a 2136962 2137039 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016918 test-1 C54E4.2 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C54E4.2a 2136962 2137039 1
CDS:C54E4.2a 2137920 2137956 1
CDS:C54E4.2a 2138141 2138239 1
CDS:C54E4.2a 2143774 2143853 1
CDS:C54E4.2a 2144094 2144160 1
CDS:C54E4.2a 2144211 2144336 1
CDS:C54E4.2a 2146034 2146177 1
CDS:C54E4.2a 2146271 2146320 1

1 Sequence

Length
681

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C54E4.2a.1 C54E4.2a.1 839   IV: 2136951-2146467