WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71G10AL.1a.1 Sequence Name  Y71G10AL.1a.1
Length (nt)  3072   Chromosome Location  IV: 2177896-2198937
Chromosome . Primary Identifier  IV Chromosome Location . Start  2177896
Chromosome Location . End  2198937 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71G10AL.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022134 hrpu-2 Y71G10AL.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71G10AL.1a Y71G10AL.1a 2031   IV: 2177930-2178025

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71G10AL.1a.1 2177896 2198937 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114645   130   IV: 2177896-2178025 Caenorhabditis elegans
Exon114646   62   IV: 2178077-2178138 Caenorhabditis elegans
Exon114648   121   IV: 2178190-2178310 Caenorhabditis elegans
Exon114650   42   IV: 2178362-2178403 Caenorhabditis elegans
Exon114653   322   IV: 2179392-2179713 Caenorhabditis elegans
Exon114655   117   IV: 2181077-2181193 Caenorhabditis elegans
Exon114657   463   IV: 2182080-2182542 Caenorhabditis elegans
Exon114659   176   IV: 2184432-2184607 Caenorhabditis elegans
Exon114661   384   IV: 2188111-2188494 Caenorhabditis elegans
Exon114663   97   IV: 2189747-2189843 Caenorhabditis elegans
Exon114665   71   IV: 2191475-2191545 Caenorhabditis elegans
Exon114667   64   IV: 2192640-2192703 Caenorhabditis elegans
Exon114671   1023   IV: 2197915-2198937 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71G10AL.1a.1 2177896 2198937 1

1 Sequence

Length
3072

1 Sequence Ontology Term

Identifier Name Description
transcript