WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71G10AR.4.1 Sequence Name  Y71G10AR.4.1
Length (nt)  2431   Chromosome Location  IV: 2199041-2209646
Chromosome . Primary Identifier  IV Chromosome Location . Start  2199041
Chromosome Location . End  2209646 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71G10AR.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044650 Y71G10AR.4 Y71G10AR.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71G10AR.4 Y71G10AR.4 1578   IV: 2199079-2199138

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71G10AR.4.1 2199041 2209646 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114727   98   IV: 2199041-2199138 Caenorhabditis elegans
Exon114728   170   IV: 2200407-2200576 Caenorhabditis elegans
Exon114729   376   IV: 2202374-2202749 Caenorhabditis elegans
Exon114730   342   IV: 2204147-2204488 Caenorhabditis elegans
Exon114731   214   IV: 2206415-2206628 Caenorhabditis elegans
Exon114732   275   IV: 2207778-2208052 Caenorhabditis elegans
Exon114733   956   IV: 2208691-2209646 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71G10AR.4.1 2199041 2209646 1

1 Sequence

Length
2431

1 Sequence Ontology Term

Identifier Name Description
transcript