WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M70.4a.1 Sequence Name  M70.4a.1
Length (nt)  2606   Chromosome Location  IV: 2253003-2263664
Chromosome . Primary Identifier  IV Chromosome Location . Start  2253003
Chromosome Location . End  2263664 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M70.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019786 famp-1 M70.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M70.4a M70.4a 2469   IV: 2253136-2253196

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M70.4a.1 2253003 2263664 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon114748   194   IV: 2253003-2253196 Caenorhabditis elegans
Exon114751   182   IV: 2253258-2253439 Caenorhabditis elegans
Exon114752   82   IV: 2253941-2254022 Caenorhabditis elegans
Exon114753   133   IV: 2254201-2254333 Caenorhabditis elegans
Exon114754   117   IV: 2254875-2254991 Caenorhabditis elegans
Exon114755   177   IV: 2255257-2255433 Caenorhabditis elegans
Exon114756   267   IV: 2257065-2257331 Caenorhabditis elegans
Exon114757   126   IV: 2257487-2257612 Caenorhabditis elegans
Exon114758   279   IV: 2258653-2258931 Caenorhabditis elegans
Exon114760   98   IV: 2259582-2259679 Caenorhabditis elegans
Exon114761   210   IV: 2259727-2259936 Caenorhabditis elegans
Exon114766   303   IV: 2260722-2261024 Caenorhabditis elegans
Exon114770   235   IV: 2262141-2262375 Caenorhabditis elegans
Exon114771   203   IV: 2263462-2263664 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M70.4a.1 2253003 2263664 -1

1 Sequence

Length
2606

1 Sequence Ontology Term

Identifier Name Description
transcript