WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38F2AL.3a Sequence Name  Y38F2AL.3a
Length (nt)  1155   Chromosome Location  IV: 2308246-2308341
Chromosome . Primary Identifier  IV Chromosome Location . Start  2308246
Chromosome Location . End  2308341
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F2AL.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29997 VHA-11, isoform a 43.4 384 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00095778
WBRNAi00009309
WBRNAi00066916
WBRNAi00085842
WBRNAi00056043
WBRNAi00076772
WBRNAi00026656
WBRNAi00028239
WBRNAi00026655
WBRNAi00113685
WBRNAi00086031
WBRNAi00069344
WBRNAi00069345

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38F2AL.3a 2308246 2308341 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006920 vha-11 Y38F2AL.3 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38F2AL.3a 2308246 2308341 -1
CDS:Y38F2AL.3a 2309523 2309794 -1
CDS:Y38F2AL.3a 2310963 2311171 -1
CDS:Y38F2AL.3a 2312624 2312909 -1
CDS:Y38F2AL.3a 2313791 2313876 -1
CDS:Y38F2AL.3a 2313932 2313999 -1
CDS:Y38F2AL.3a 2314397 2314534 -1

1 Sequence

Length
1155

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38F2AL.3a.1 Y38F2AL.3a.1 1619   IV: 2307815-2314567