WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38F2AL.3b Sequence Name  Y38F2AL.3b
Length (nt)  402   Chromosome Location  IV: 2312798-2312907
Chromosome . Primary Identifier  IV Chromosome Location . Start  2312798
Chromosome Location . End  2312907
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F2AL.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38743 VHA-11, isoform b 14.8 133 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00009309
WBRNAi00066916
WBRNAi00076772
WBRNAi00026656
WBRNAi00028239
WBRNAi00026655
WBRNAi00113685
WBRNAi00069344
WBRNAi00069345

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38F2AL.3b 2312798 2312907 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006920 vha-11 Y38F2AL.3 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38F2AL.3b 2312798 2312907 -1
CDS:Y38F2AL.3b 2313791 2313876 -1
CDS:Y38F2AL.3b 2313932 2313999 -1
CDS:Y38F2AL.3b 2314397 2314534 -1

1 Sequence

Length
402

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38F2AL.3b.1 Y38F2AL.3b.1 592   IV: 2312641-2314567