WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38F2AL.1 Sequence Name  Y38F2AL.1
Length (nt)  912   Chromosome Location  IV: 2324064-2324269
Chromosome . Primary Identifier  IV Chromosome Location . Start  2324064
Chromosome Location . End  2324269
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F2AL.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42187 NSY-4 33.8 303 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00027517
WBRNAi00001055
WBRNAi00056041
WBRNAi00020299
WBRNAi00026657
WBRNAi00026658
WBRNAi00078922
WBRNAi00110922

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38F2AL.1 2324064 2324269 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021415 nsy-4 Y38F2AL.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38F2AL.1 2324064 2324269 1
CDS:Y38F2AL.1 2324663 2324787 1
CDS:Y38F2AL.1 2324969 2325100 1
CDS:Y38F2AL.1 2325605 2325863 1
CDS:Y38F2AL.1 2326266 2326388 1
CDS:Y38F2AL.1 2326437 2326503 1

1 Sequence

Length
912

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38F2AL.1.2 Y38F2AL.1.2 1251   IV: 2323271-2326737
Transcript:Y38F2AL.1.3 Y38F2AL.1.3 1158   IV: 2324052-2326737
Transcript:Y38F2AL.1.1 Y38F2AL.1.1 1154   IV: 2324058-2326739