WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38F2AR.1a Sequence Name  Y38F2AR.1a
Length (nt)  1596   Chromosome Location  IV: 2390821-2391249
Chromosome . Primary Identifier  IV Chromosome Location . Start  2390821
Chromosome Location . End  2391249
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F2AR.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39434 ERI-5, isoform a 61.6 531 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00056046
WBRNAi00020307

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38F2AR.1a 2390821 2391249 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021419 eri-5 Y38F2AR.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38F2AR.1a 2390821 2391249 1
CDS:Y38F2AR.1a 2392022 2392259 1
CDS:Y38F2AR.1a 2393065 2393358 1
CDS:Y38F2AR.1a 2393550 2393661 1
CDS:Y38F2AR.1a 2395097 2395434 1
CDS:Y38F2AR.1a 2395854 2396038 1

1 Sequence

Length
1596

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38F2AR.1a.1 Y38F2AR.1a.1 1821   IV: 2390821-2396263