WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AL.1.1 Sequence Name  Y69A2AL.1.1
Length (nt)  1327   Chromosome Location  IV: 2476686-2480316
Chromosome . Primary Identifier  IV Chromosome Location . Start  2476686
Chromosome Location . End  2480316 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AL.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001705 grd-16 Y69A2AL.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AL.1 Y69A2AL.1 1215   IV: 2476700-2476814

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AL.1.1 2476686 2480316 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115054   129   IV: 2476686-2476814 Caenorhabditis elegans
Exon115055   275   IV: 2477131-2477405 Caenorhabditis elegans
Exon115058   357   IV: 2478196-2478552 Caenorhabditis elegans
Exon115059   79   IV: 2479024-2479102 Caenorhabditis elegans
Exon115060   133   IV: 2479149-2479281 Caenorhabditis elegans
Exon115061   354   IV: 2479963-2480316 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AL.1.1 2476686 2480316 1

1 Sequence

Length
1327

1 Sequence Ontology Term

Identifier Name Description
transcript