WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AR.19b.1 Sequence Name  Y69A2AR.19b.1
Length (nt)  4111   Chromosome Location  IV: 2488820-2494148
Chromosome . Primary Identifier  IV Chromosome Location . Start  2488820
Chromosome Location . End  2494148 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.19b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022090 Y69A2AR.19 Y69A2AR.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.19b Y69A2AR.19b 3996   IV: 2488850-2488889

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.19b.1 2488820 2494148 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115069   70   IV: 2488820-2488889 Caenorhabditis elegans
Exon115073   66   IV: 2488944-2489009 Caenorhabditis elegans
Exon115076   147   IV: 2489228-2489374 Caenorhabditis elegans
Exon115080   126   IV: 2489631-2489756 Caenorhabditis elegans
Exon115083   93   IV: 2489989-2490081 Caenorhabditis elegans
Exon115085   2311   IV: 2490130-2492440 Caenorhabditis elegans
Exon115088   261   IV: 2492493-2492753 Caenorhabditis elegans
Exon115091   139   IV: 2492806-2492944 Caenorhabditis elegans
Exon115094   236   IV: 2493156-2493391 Caenorhabditis elegans
Exon115098   325   IV: 2493443-2493767 Caenorhabditis elegans
Exon115101   337   IV: 2493812-2494148 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.19b.1 2488820 2494148 1

1 Sequence

Length
4111

1 Sequence Ontology Term

Identifier Name Description
transcript