WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AR.19a.1 Sequence Name  Y69A2AR.19a.1
Length (nt)  4170   Chromosome Location  IV: 2488820-2494186
Chromosome . Primary Identifier  IV Chromosome Location . Start  2488820
Chromosome Location . End  2494186 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.19a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022090 Y69A2AR.19 Y69A2AR.19 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.19a Y69A2AR.19a 4017   IV: 2488850-2488889

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.19a.1 2488820 2494186 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115070   70   IV: 2488820-2488889 Caenorhabditis elegans
Exon115072   66   IV: 2488944-2489009 Caenorhabditis elegans
Exon115075   147   IV: 2489228-2489374 Caenorhabditis elegans
Exon115078   147   IV: 2489610-2489756 Caenorhabditis elegans
Exon115082   93   IV: 2489989-2490081 Caenorhabditis elegans
Exon115084   2311   IV: 2490130-2492440 Caenorhabditis elegans
Exon115087   261   IV: 2492493-2492753 Caenorhabditis elegans
Exon115090   139   IV: 2492806-2492944 Caenorhabditis elegans
Exon115093   236   IV: 2493156-2493391 Caenorhabditis elegans
Exon115097   325   IV: 2493443-2493767 Caenorhabditis elegans
Exon115102   375   IV: 2493812-2494186 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.19a.1 2488820 2494186 1

1 Sequence

Length
4170

1 Sequence Ontology Term

Identifier Name Description
transcript