WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AR.21.1 Sequence Name  Y69A2AR.21.1
Length (nt)  553   Chromosome Location  IV: 2494516-2495174
Chromosome . Primary Identifier  IV Chromosome Location . Start  2494516
Chromosome Location . End  2495174 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.21.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022092 ccdc-12 Y69A2AR.21 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.21 Y69A2AR.21 510   IV: 2494552-2494767

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.21.1 2494516 2495174 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115103   252   IV: 2494516-2494767 Caenorhabditis elegans
Exon115104   154   IV: 2494821-2494974 Caenorhabditis elegans
Exon115105   147   IV: 2495028-2495174 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.21.1 2494516 2495174 -1

1 Sequence

Length
553

1 Sequence Ontology Term

Identifier Name Description
transcript