WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AR.18.1 Sequence Name  Y69A2AR.18.1
Length (nt)  1172   Chromosome Location  IV: 2495735-2497675
Chromosome . Primary Identifier  IV Chromosome Location . Start  2495735
Chromosome Location . End  2497675 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.18.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022089 Y69A2AR.18 Y69A2AR.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.18 Y69A2AR.18 900   IV: 2495749-2495835

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.18.1 2495735 2497675 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115107   101   IV: 2495735-2495835 Caenorhabditis elegans
Exon115109   105   IV: 2495883-2495987 Caenorhabditis elegans
Exon115111   250   IV: 2496040-2496289 Caenorhabditis elegans
Exon115113   110   IV: 2496344-2496453 Caenorhabditis elegans
Exon115115   247   IV: 2496503-2496749 Caenorhabditis elegans
Exon115118   359   IV: 2497317-2497675 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.18.1 2495735 2497675 1

1 Sequence

Length
1172

1 Sequence Ontology Term

Identifier Name Description
transcript