WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AR.16a.1 Sequence Name  Y69A2AR.16a.1
Length (nt)  3566   Chromosome Location  IV: 2497803-2530296
Chromosome . Primary Identifier  IV Chromosome Location . Start  2497803
Chromosome Location . End  2530296 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.16a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022087 Y69A2AR.16 Y69A2AR.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.16a Y69A2AR.16a 3363   IV: 2497817-2497858

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y69A2AR.16a.1 2497803 2530296 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115119   56   IV: 2497803-2497858 Caenorhabditis elegans
Exon115120   103   IV: 2498032-2498134 Caenorhabditis elegans
Exon115121   142   IV: 2499194-2499335 Caenorhabditis elegans
Exon115122   259   IV: 2501767-2502025 Caenorhabditis elegans
Exon115123   186   IV: 2504312-2504497 Caenorhabditis elegans
Exon115129   157   IV: 2509986-2510142 Caenorhabditis elegans
Exon115131   257   IV: 2511456-2511712 Caenorhabditis elegans
Exon115134   329   IV: 2515057-2515385 Caenorhabditis elegans
Exon115136   312   IV: 2518824-2519135 Caenorhabditis elegans
Exon115139   151   IV: 2520634-2520784 Caenorhabditis elegans
Exon115142   137   IV: 2521778-2521914 Caenorhabditis elegans
Exon115145   347   IV: 2522775-2523121 Caenorhabditis elegans
Exon115148   251   IV: 2524777-2525027 Caenorhabditis elegans
Exon115151   258   IV: 2526592-2526849 Caenorhabditis elegans
Exon115155   144   IV: 2527812-2527955 Caenorhabditis elegans
Exon115159   221   IV: 2528302-2528522 Caenorhabditis elegans
Exon115166   256   IV: 2530041-2530296 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y69A2AR.16a.1 2497803 2530296 1

1 Sequence

Length
3566

1 Sequence Ontology Term

Identifier Name Description
transcript