WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y69A2AR.16b.1 Sequence Name  Y69A2AR.16b.1
Length (nt)  2790   Chromosome Location  IV: 2504339-2530107
Chromosome . Primary Identifier  IV Chromosome Location . Start  2504339
Chromosome Location . End  2530107 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y69A2AR.16b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022087 Y69A2AR.16 Y69A2AR.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y69A2AR.16b Y69A2AR.16b 2790   IV: 2504339-2504497

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.16b.1 2504339 2530107 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon115124   159   IV: 2504339-2504497 Caenorhabditis elegans
Exon115130   157   IV: 2509986-2510142 Caenorhabditis elegans
Exon115132   257   IV: 2511456-2511712 Caenorhabditis elegans
Exon115135   329   IV: 2515057-2515385 Caenorhabditis elegans
Exon115137   312   IV: 2518824-2519135 Caenorhabditis elegans
Exon115140   151   IV: 2520634-2520784 Caenorhabditis elegans
Exon115143   137   IV: 2521778-2521914 Caenorhabditis elegans
Exon115146   347   IV: 2522775-2523121 Caenorhabditis elegans
Exon115149   251   IV: 2524777-2525027 Caenorhabditis elegans
Exon115152   258   IV: 2526592-2526849 Caenorhabditis elegans
Exon115156   144   IV: 2527812-2527955 Caenorhabditis elegans
Exon115160   221   IV: 2528302-2528522 Caenorhabditis elegans
Exon115163   67   IV: 2530041-2530107 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y69A2AR.16b.1 2504339 2530107 1

1 Sequence

Length
2790

1 Sequence Ontology Term

Identifier Name Description
transcript